species:   Pimic
pid:       PID1830
parent:    Pmic_miR-7
paralog:   
locus:     scaffold_106:26653-26727
matures:   ['UCCAGCAAGGGGGAAUGGGCU', 'CUCGUUCCCUUUGCUGGACG']
srr:       SRP140519
genome:    /Users/jax/+Genomes/Fungal_genomes/Pimic.Pismi1_AssemblyScaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wong-Bajracharya2022-kz.SRP140519.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wong-Bajracharya2022-kz.SRP140519.cram scaffold_106:26653-26727

0 out of bounds
12 alignments
12 proper strand
2 stranded perfect matches

                ********************************************               
AUUAAAAUUUGCCAAGCGUCCAGCAAGGGGGAAUGGGCUACUCGUUCCCUUUGCUGGACGCUUGGCGUCGCCCAC
..........((((((((((((((((((((.((((((...)))))))))))))))))))))))))).........
------------------UCCAGCAAGGGGGAAUGGGCU------------------------------------ l=21 a=2 c
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=0 c*
------------------UCCAGCAAGGGGGAAUGGGCU------------------------------------ l=21 a=2 ma
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=0 ma*

------------------UCCAGCAAGGGGGAAUGGGCU------------------------------------ l=21 a=2 (c,ma)
------------------UCCAGCAAGGGGGAAUGGGCUACUCGUUCCCUUUGCcGGACG--------------- l=42 a=2 
---------------------------------UGGGCUACUCGUUCCCUUUGCcG------------------- l=23 a=2 
-------------------------------------CUACUCGUUCCCUUUGCcGGACG--------------- l=23 a=1 
--------------------------------------UACUCGUUCCCUUUGCcGG------------------ l=19 a=1 
--------------------------------------UACUCGUUCCCUUUGCcGGACG--------------- l=22 a=1 
----------------------------------------CUCGUUCCCUUUGCcGGACG--------------- l=20 a=3 

mb-01011
ax-1011011
ku-01
ss-101111111100
fn-011
